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1

Towards identifying the full set of genes expressed during cassava post-harvest physiological deterioration

Kim Reilly, Diana Bernal, Diego F. Cortés, Rocío Gómez-Vásquez, Joe Tohme, John R. Beeching

Journal:

Plant Molecular Biology

Year:

2007

Language:

english

File:

PDF, 443 KB

english, 2007

2

The use of geographical information systems in biodiversity exploration and conservation

Peter G. Jones, Stephen E. Beebe, Joe Tohme, Nicholas W. Galwey

Journal:

Biodiversity and Conservation

Year:

1997

Language:

english

File:

PDF, 194 KB

english, 1997

3

Mapping wound-response genes involved in post-harvest physiological deterioration (PPD) of cassava (Manihot esculentaCrantz)

Diego Fernando Cortés, Kim Reilly, Emmanuel Okogbenin, John R. Beeching, Carlos Iglesias, Joe Tohme

Journal:

Year:

2002

Language:

english

File:

PDF, 95 KB

english, 2002

4

Characterization of pathogenic and nonpathogenic strains of Xanthomonas axonopodis pv. manihotis by PCR-based DNA fingerprinting techniques

Carolina Gonzalez, Silvia Restrepo, Joe Tohme, Valérie Verdier

Journal:

FEMS Microbiology Letters

Year:

2002

Language:

english

File:

PDF, 390 KB

english, 2002

5

The potential of using biotechnology to improve cassava: a review

Chavarriaga-Aguirre, Paul, Brand, Alejandro, Medina, Adriana, Prías, Mónica, Escobar, Roosevelt, Martinez, Juan, Díaz, Paula, López, Camilo, Roca, Willy M, Tohme, Joe

Journal:

In Vitro Cellular & Developmental Biology - Plant

Year:

2016

Language:

english

File:

PDF, 2.22 MB

english, 2016

6

Phylogenetic patterns in the genus Manihot (Euphorbiaceae) inferred from analyses of nuclear and chloroplast DNA regions

Juliana Chacón, Santiago Madriñán, Daniel Debouck, Fausto Rodriguez, Joe Tohme

Journal:

Molecular Phylogenetics and Evolution

Year:

2008

Language:

english

File:

PDF, 216 KB

english, 2008

7

Cross-amplification of microsatellite loci in a neotropicalQuercusspecies and standardization of DNA extraction from mature leaves dried in silica gel

Juan F. Fern’andez, Victoria L. Sork, Gerardo Gallego, Jershon L’opez, Adriana Bohorques, Joe Tohme

Journal:

Plant Molecular Biology Reporter

Year:

2000

Language:

english

File:

PDF, 51 KB

english, 2000

8

A universal core genetic map for rice

Julie Orjuela, Andrea Garavito, Matthieu Bouniol, Juan David Arbelaez, Laura Moreno, Jennifer Kimball, Gregory Wilson, Jean-François Rami, Joe Tohme, Susan R. McCouch, Mathias Lorieux

Journal:

Theoretical and Applied Genetics

Year:

2010

Language:

english

File:

PDF, 305 KB

english, 2010

9

Through the genetic bottleneck:O. rufipogonas a source of trait-enhancing alleles forO. sativa

Susan R. McCouch, Megan Sweeney, Jiming Li, Hui Jiang, Michael Thomson, Endang Septiningsih, Jeremy Edwards, Pilar Moncada, Jinhua Xiao, Amanda Garris, Tom Tai, Cesar Martinez, Joe Tohme, M. Sugiono,

Journal:

Year:

2007

Language:

english

File:

PDF, 400 KB

english, 2007

10

Identification of microsatellite markers linked to the blast resistance genePi-1(t)in rice

Jorge Luis Fuentes, Fernando José Correa-Victoria, Fabio Escobar, Gustavo Prado, Girlena Aricapa, Myriam Cristina Duque, Joe Tohme

Journal:

Year:

2008

Language:

english

File:

PDF, 262 KB

english, 2008

11

A unigene catalogue of 5700 expressed genes in cassava

Camilo Lopez, Véronique Jorge, Benoît Piégu, Chickelu Mba, Diego Cortes, Silvia Restrepo, Mauricio Soto, Michèle Laudié, Christel Berger, Richard Cooke, Michel Delseny, Joe Tohme, Valérie Verdier

Journal:

Plant Molecular Biology

Year:

2004

Language:

english

File:

PDF, 223 KB

english, 2004

12

The Global Cassava Partnership for Genetic Improvement

Claude M. Fauquet, Joe Tohme

Journal:

Plant Molecular Biology

Year:

2004

Language:

english

File:

PDF, 188 KB

english, 2004

13

Gene expression profile in response toXanthomonas axonopodispv.manihotisinfection in cassava using a cDNA microarray

Camilo Lopez, Mauricio Soto, Silvia Restrepo, Benoît Piégu, Richard Cooke, Michel Delseny, Joe Tohme, Valérie Verdier

Journal:

Plant Molecular Biology

Year:

2005

Language:

english

File:

PDF, 577 KB

english, 2005

14

An EST resource for cassava and other species of Euphorbiaceae

James V. Anderson, Michel Delseny, Martin A. Fregene, Veronique Jorge, Chikelu Mba, Camilo Lopez, Silvia Restrepo, Mauricio Soto, Benoit Piegu, Valerie Verdier, Richard Cooke, Joe Tohme, David P. Horv

Journal:

Plant Molecular Biology

Year:

2004

Language:

english

File:

PDF, 193 KB

english, 2004

15

Oxidative stress responses during cassava post-harvest physiological deterioration

Kim Reilly, Rocío Góomez-Váasquez, Holger Buschmann, Joe Tohme, John R. Beeching

Journal:

Plant Molecular Biology

Year:

2004

Language:

english

File:

PDF, 569 KB

english, 2004

16

BAC-end Sequence Analysis and a Draft Physical Map of the Common Bean (Phaseolus vulgarisL.) Genome

Jessica A. Schlueter, Jose Luis Goicoechea, Kristi Collura, Navdeep Gill, Jer-Young Lin, Yeisoo Yu, Dave Kudrna, Andrea Zuccolo, C. Eduardo Vallejos, Monica Muñoz-Torres, Matthew W. Blair, Joe Tohme,

Journal:

Tropical Plant Biology

Year:

2008

Language:

english

File:

PDF, 354 KB

english, 2008

17

Identification and Characterization of the Cassava Core-Clock GeneEARLY FLOWERING 4

Oluwabusayo Sarah Adeyemo, Elsebeth Kolmos, Joe Tohme, Paul Chavariaga, Martin Fregene, Seth J. Davis

Journal:

Tropical Plant Biology

Year:

2011

Language:

english

File:

PDF, 605 KB

english, 2011

18

Identification of genes in cassava that are differentially expressed during infection with Xanthomonas axonopodis pv. manihotis

MARCELLA SANTAELLA, EDNA SUÁREZ, CAMILO LÓPEZ, CAROLINA GONZÁLEZ, GLORIA MOSQUERA, SILVIA RESTREPO, JOE TOHME, ALFREDO BADILLO, VALÉRIE VERDIER

Journal:

Molecular Plant Pathology

Year:

2004

Language:

english

File:

PDF, 228 KB

english, 2004

19

Characterization of pathogenic and nonpathogenic strains of Xanthomonas axonopodis pv. manihotis by PCR-based DNA fingerprinting techniques

Carolina Gonzalez, Silvia Restrepo, Joe Tohme, Valérie Verdier

Journal:

FEMS Microbiology Letters

Year:

2002

Language:

english

File:

PDF, 384 KB

english, 2002

20

Genomic comparison between Xanthomonas oryzae pv. oryzae and Xanthomonas oryzae pv. oryzicola, using suppression-subtractive hybridization

Mauricio Soto-Suárez, Carolina González, Benoît Piégu, Joe Tohme, Valérie Verdier

Journal:

FEMS Microbiology Letters

Year:

2010

Language:

english

File:

PDF, 196 KB

english, 2010

21

Variability of chloroplast DNA in the genus Passiflora L.

Inés Sánchez, Fernando Angel, Mikkel Grum, Miriam C. Duque, Mario Lobo, Joe Tohme, William Roca

Journal:

Year:

1999

Language:

english

File:

PDF, 117 KB

english, 1999

22

Analyses of genetic diversity in Cuban rice varieties using isozyme, RAPD and AFLP markers

Jorge Luis Fuentes, Fabio Escobar, Alba Alvarez, Geraldo Gallego, Miriam Cristina Duque, Mirle Ferrer, Juan Enrrique Deus, Joe M. Tohme

Journal:

Year:

1999

Language:

english

File:

PDF, 117 KB

english, 1999

23

The Tpv2 family of retrotransposons of Phaseolus vulgaris: structure, integration characteristics, and use for genotype classification

Karin Garber, Ivan Bilic, Oliver Pusch, Joe Tohme, Andreas Bachmair, Dieter Schweizer, Verena Jantsch

Journal:

Plant Molecular Biology

Year:

1999

Language:

english

File:

PDF, 163 KB

english, 1999

24

A new variant of arcelin in wild common bean, Phaseolus vulgaris L., from southern Mexico

Jorge A. Acosta-Gallegos, Constanza Quintero, Jaime Vargas, Orlando Toro, Joe Tohme, C. Cardona

Journal:

Genetic Resources and Crop Evolution

Year:

1998

Language:

english

File:

PDF, 199 KB

english, 1998

25

Using microsatellites, isozymes and AFLPs to evaluate genetic diversity and redundancy in the cassava core collection and to assess the usefulness of DNA-based markers to maintain germplasm collections

Paul Chavarriaga-Aguirre, María M. Maya, Joe Tohme, Myriam C. Duque, Carlos Iglesias, Merideth W. Bonierbale, Steve Kresovich, Gary Kochert

Journal:

Molecular Breeding

Year:

1999

Language:

english

File:

PDF, 166 KB

english, 1999

26

An AFLP diversity study of the genusPassiflorafocusing on subgenusTacsonia

Sergio Segura, Geo Coppens d'Eeckenbrugge, Adriana Bohorquez, Patrick Ollitrault, Joe Tohme

Journal:

Genetic Resources and Crop Evolution

Year:

2002

Language:

english

File:

PDF, 1.62 MB

english, 2002

27

Hydroxyproline-rich glycoproteins expressed during stress responses in cassava

Yuanhuai Han, Rocío Gómez-Vásquez, Kim Reilly, Hongying Li, Joe Tohme, Richard M. Cooper, John R. Beeching

Journal:

Year:

2001

Language:

english

File:

PDF, 159 KB

english, 2001

28

Genetic variation analysis of the genus Passiflora L. using RAPD markers

Diego Fajardo, Fernando Angel, Mikkel Grum, Joe Tohme, Mario Lobo, William M. Roca, Inés Sanchez

Journal:

Year:

1998

Language:

english

File:

PDF, 506 KB

english, 1998

29

Oxidative stress responses during cassava post-harvest physiological deterioration

Kim Reilly, Rocío Gómez-Vásquez, Holger Buschmann, Joe Tohme, John R. Beeching

Journal:

Plant Molecular Biology

Year:

2003

Language:

english

File:

PDF, 696 KB

english, 2003

30

Genetic diversity of traditional South American Landraces of Cassava (Manihot esculentaCrantz): an analysis using microsatellites

Marianne Elias, Gilda Santos Mühlen, Doyle McKey, Ana Carolina Roa, Joe Tohme

Journal:

Economic Botany

Year:

2004

Language:

english

File:

PDF, 1.10 MB

english, 2004

31

Isolation and characterisation of a cassava catalase expressed during post-harvest physiological deterioration

Kim Reilly, Yuanhuai Han, Joe Tohme, John R. Beeching

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression

Year:

2001

Language:

english

File:

PDF, 718 KB

english, 2001

32

In plantagene expression analysis ofXanthomonas oryzaepathovaroryzae, African strain MAI1

Mauricio Soto-Suárez, Diana Bernal, Carolina González, Boris Szurek, Romain Guyot, Joe Tohme, Valérie Verdier

Journal:

BMC Microbiology

Year:

2010

Language:

english

File:

PDF, 1.19 MB

english, 2010

33

Identification of aRice stripe necrosis virusresistance locus and yield component QTLs usingOryza sativa×O. glaberrimaintrogression lines

Andrés Gonzalo Gutiérrez, Silvio James Carabalí, Olga Ximena Giraldo, Pompilio César Martínez, Fernando Correa, Gustavo Prado, Joe Tohme, Mathias Lorieux

Journal:

BMC Plant Biology

Year:

2010

Language:

english

File:

PDF, 1012 KB

english, 2010

34

Sequencing analysis of 20,000 full-length cDNA clones from cassava reveals lineage specific expansions in gene families related to stress response

Tetsuya Sakurai, Germán Plata, Fausto Rodríguez-Zapata, Motoaki Seki, Andrés Salcedo, Atsushi Toyoda, Atsushi Ishiwata, Joe Tohme, Yoshiyuki Sakaki, Kazuo Shinozaki, Manabu Ishitani

Journal:

BMC Plant Biology

Year:

2007

Language:

english

File:

PDF, 539 KB

english, 2007

35

Accumulation of Hydroxycoumarins During Post-harvest Deterioration of Tuberous Roots of Cassava (Manihot esculenta Crantz)

Holger Buschmann, Maria X. Rodriguez, Joe Tohme, John R. Beeching

Journal:

Annals of Botany

Year:

2000

Language:

english

File:

PDF, 323 KB

english, 2000

36

Integration of genomics approach with traditional breeding towards improving abiotic stress adaptation: drought and aluminum toxicity as case studies

Manabu Ishitani, Idupulapati Rao, Peter Wenzl, Steve Beebe, Joe Tohme

Journal:

Field Crops Research

Year:

2004

Language:

english

File:

PDF, 315 KB

english, 2004

37

Evaluating purple passion fruit (Passiflora edulisSims f.edulis) genetic variability in individuals from commercial plantations in Colombia

Ortiz, Diana Carolina, Bohórquez, Adriana, Duque, Myriam Cristina, Tohme, Joe, Cuéllar, David, Mosquera Vásquez, Teresa

Journal:

Genetic Resources and Crop Evolution

Year:

2012

Language:

english

File:

PDF, 585 KB

english, 2012

38

Isolation and characterization of RNase LTR sequences of Ty1- copia retrotransposons in common bean ( Phaseolus vulgaris L.)

Galindo, Leonardo Miguel, Gaitán-Solís, Eliana, Baccam, Prasith, Tohme, Joe

Journal:

Year:

2004

File:

PDF, 1.79 MB

2004

39

Hydrogen Peroxide and Flavan-3-ols in Storage Roots of Cassava ( Manihot esculenta Crantz) during Postharvest Deterioration

Buschmann, Holger, Reilly, Kim, Rodriguez, Maria X., Tohme, Joe, Beeching, John R.

Journal:

Journal of Agricultural and Food Chemistry

Year:

2000

Language:

english

File:

PDF, 657 KB

english, 2000

40

Mapping EST-derived SSRs and ESTs involved in resistance to bacterial blight in Manihot esculenta

Somers, Daryl, López, Camilo E., Quesada-Ocampo, Lina M., Bohórquez, Adriana, Duque, Myriam Cristina, Vargas, Jaime, Tohme, Joe, Verdier, Valérie

Journal:

Year:

2007

Language:

english

File:

PDF, 1.33 MB

english, 2007

41

Flexible and scalable genotyping-by-sequencing strategies for population studies

Heffelfinger, Christopher, Fragoso, Christopher A, Moreno, Maria A, Overton, John D, Mottinger, John P, Zhao, Hongyu, Tohme, Joe, Dellaporta, Stephen L

Journal:

Year:

2014

Language:

english

File:

PDF, 4.60 MB

english, 2014

42

Identification of Cassava MicroRNAs under Abiotic Stress

Ballén-Taborda, Carolina, Plata, Germán, Ayling, Sarah, Rodríguez-Zapata, Fausto, Becerra Lopez-Lavalle, Luis Augusto, Duitama, Jorge, Tohme, Joe

Journal:

International Journal of Genomics

Year:

2013

Language:

english

File:

PDF, 1.31 MB

english, 2013

43

Cross-Species Amplification of Cassava (Manihot esculenta) (Euphorbiaceae) Microsatellites: Allelic Polymorphism and Degree of Relationship

Ana C. Roa, Paul Chavarriaga-Aguirre, Myriam C. Duque, Maria M. Maya, Merideth W. Bonierbale, Carlos Iglesias and Joe Tohme

Journal:

American Journal of Botany

Year:

2000

Language:

english

File:

PDF, 1.34 MB

english, 2000

44

Provitamin A Accumulation in Cassava (Manihot esculenta) Roots Driven by a Single Nucleotide Polymorphism in a Phytoene Synthase Gene

Ralf Welsch, Jacobo Arango, Cornelia Bär, Bertha Salazar, Salim Al-Babili, Jesús Beltrán, Paul Chavarriaga, Hernan Ceballos, Joe Tohme and Peter Beyer

Journal:

Year:

2010

Language:

english

File:

PDF, 1.75 MB

english, 2010

45

Genetic Diversity of Traditional South American Landraces of Cassava (Manihot esculenta Crantz): An Analysis Using Microsatellites

Marianne Elias, Gilda Santos Mühlen , Doyle McKey, Ana Carolina Roa and Joe Tohme

Journal:

Economic Botany

Year:

2004

Language:

english

File:

PDF, 759 KB

english, 2004

46

Two Novel DNAs That Enhance Symptoms and Overcome CMD2 Resistance to Cassava Mosaic Disease

Ndunguru, Joseph, De León, Leandro, Doyle, Catherine D., Sseruwagi, Peter, Plata, German, Legg, James P., Thompson, Graham, Tohme, Joe, Aveling, Theresa, Ascencio-Ibáñez, Jose T., Hanley-Bowdoin, Lind

Journal:

Journal of Virology

Year:

2016

Language:

english

File:

PDF, 5.92 MB

english, 2016

47

Identifying Resistance Gene Analogs Associated With Resistances to Different Pathogens in Common Bean

López, Camilo E., Acosta, Iván F., Jara, Carlos, Pedraza, Fabio, Gaitán-Solís, Eliana, Gallego, Gerardo, Beebe, Steve, Tohme, Joe

Journal:

Year:

2003

Language:

english

File:

PDF, 202 KB

english, 2003

48

Quantitative Trait Loci for Root Architecture Traits Correlated with Phosphorus Acquisition in Common Bean

Beebe, Stephen E., Rojas-Pierce, Marcela, Yan, Xiaolong, Blair, Matthew W., Pedraza, Fabio, Muñoz, Fernando, Tohme, Joe, Lynch, Jonathan P.

Journal:

Year:

2006

Language:

english

File:

PDF, 271 KB

english, 2006

49

AFLP Analysis of Gene Pools of a Wild Bean Core Collection

Tohme, Joe, Gonzalez, D. Orlando, Beebe, Steve, Duque, Myriam C.

Journal:

Year:

1996

Language:

english

File:

PDF, 289 KB

english, 1996

50

Nonenzymatic β-Carotene Degradation in Provitamin A-Biofortified Crop Plants

Schaub, Patrick, Wüst, Florian, Koschmieder, Julian, Yu, Qiuju, Virk, Parminder, Tohme, Joe, Beyer, Peter

Journal:

Journal of Agricultural and Food Chemistry

Year:

2017

Language:

english

File:

PDF, 1.52 MB

english, 2017